Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015902156.1_cds_XP_016452176.1_46444
CDS Infomation

[gene=LOC107776767] [db_xref=GeneID:107776767] [protein=EH domain-containing protein 1-like isoform X2] [protein_id=XP_016452176.1] [location=join(14546..14551,14646..14703,15094..15149,15228..15267,15397..15455,16355..16468,16607..16709,16803..16852,17385..17513,17600..17851,17949..18028,18516..18642,18748..18891,18980..19165)] [gbkey=CDS]
Sequence

ATGCAGTTGGTCTCTTTGGCTCAAGCTGGCCATGCAGTGACAAGTGATTTCTTAAATGCT
GAAGTTGATTTTGAAAATTTGCAGCTACCTTCACTGGAAGGTCTGGATAGACTTCTTGCT
AAGAAGAAGCGTGTGGCTAAATGGGTACCTGACCAGAATGGCAGTCTTGTGCTACCTTCA
CGAGCTAATTGGTTTTCATCATCAAAATCTTCAAAGAAGGTTTCTTCAAACTATGTCACA
TCAATAATTGATGGACTGAAGAAGTTGTACGTCAAGAAACTAAAGCCATTGGAAGTTACA
TATCACTTCAGTGATTTTGTCTCTCCTCTATTGGCAAATAGTGATTTTGATGCCAAACCA
ATGGTGATGCTTTTGGGTCAATACTCCACTGGAAAAACAACCTTCATTAAGCATTTACTC
AGAACCAGTTATCCAGGTGCTCATATTGGACCAGAGCCTACAACAGATAGATTTGTCGTC
GTCATGAACGGACCTGACGAAAGAAGTGTCCCGGGGAATACAATTGCTGTTCAAGCAGAT
ATGCCATTTAGCGGTTTGACAACTTTTGGAACGGCATTTTTGTCAAAGTTTGAGTGTTCT
CAAATGCCGCATCCTCTGTTAGAGAATATCACTATTGTGGATACTCCGGGAGTTTTATCA
GGGGAAAAGCAGCGAACACAAAGGAGCTATGATTTTACGGGGGTGACGTCTTGGTTTGCT
GCCAAATGTGATCTCATTCTGCTATTGTTTGATCCCCACAAACTTGATATTAGCGATGAA
TTCAAACGTGTGATTGCATCTCTTCAAGGTCATGATGATAAGATACGAGTTGTTTTGAAC
AAGGCTGACCAAGTTGATACTCAACAACTAATGAGGGTTTATGGAGCATTAATGTGGTCT
TTAGGGAAGGTTCTGAATACCCCTGAAGTTACGCGTGTCTACATAGGATCATTTAATGAC
AGACCTATAAATGAGGCTCCGACCGGGCCTGTGGGGAAAGAACTTTTTGAAAAGGAACAA
GATGATCTCCTTTCGGACCTGAAAAACATACCAAAGAAGGCTTGTGATCGTCGTATAAAT
GAATTCGTAAAACGTGCTAGAGCTGCCAAGATACATGCTTATATAATAAGTCACCTGAAA
AAGGAAATGCCTGCTATGATGGGCAAAGCGAAGACACAGAAAAGACTTATCGATAACTTG
GAAGATGAATTCGTAAAGATTCAGAAAGAACATCATCTACCAGCCGGGGATTTTCCAAAT
GTTGAACATTTTAGAGAAGTTTTGAGTGGTTATAGCATTGACAAGTTTGAGAAGTTGAAA
CCTAAGTTAATACAAGCTGTTGATGACATGCTTGGTTATGACATCCCTGAACTTCTCAAA
AATTTCAGGAATCCTTACGACTAA

Peptide Sequence

PEP ID

XP_016452176.1
PEP Infomation

PREDICTED: EH domain-containing protein 1-like isoform X2 [Nicotiana tabacum]
Sequence

MQLVSLAQAGHAVTSDFLNAEVDFENLQLPSLEGLDRLLAKKKRVAKWVPDQNGSLVLPS
RANWFSSSKSSKKVSSNYVTSIIDGLKKLYVKKLKPLEVTYHFSDFVSPLLANSDFDAKP
MVMLLGQYSTGKTTFIKHLLRTSYPGAHIGPEPTTDRFVVVMNGPDERSVPGNTIAVQAD
MPFSGLTTFGTAFLSKFECSQMPHPLLENITIVDTPGVLSGEKQRTQRSYDFTGVTSWFA
AKCDLILLLFDPHKLDISDEFKRVIASLQGHDDKIRVVLNKADQVDTQQLMRVYGALMWS
LGKVLNTPEVTRVYIGSFNDRPINEAPTGPVGKELFEKEQDDLLSDLKNIPKKACDRRIN
EFVKRARAAKIHAYIISHLKKEMPAMMGKAKTQKRLIDNLEDEFVKIQKEHHLPAGDFPN
VEHFREVLSGYSIDKFEKLKPKLIQAVDDMLGYDIPELLKNFRNPYD

Transcript Sequence

Gene sequence data has not been registered.